TAP PcG_MSI in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5

The colour code corresponds to the rules for the domains:

should be contained

should not be contained

(Domain names are clickable)

List of proteins (7)

hide all | show all

name	name addition	Click button to show/hide sequence:	Download sequence?
c1_seq1_7_rc	comp8512_c1_seq1_7 [1809 - 415] (REVERSE SENSE) len=1981 path=[1:0-650 652:651-1178 1180:1179-1179 1181:1180-1980]
c1_seq2_6_rc	comp8512_c1_seq2_6 [1288 - 56] (REVERSE SENSE) len=1460 path=[4047:0-129 652:130-657 1180:658-658 1181:659-1459]
c0_seq1_5_rc	comp8899_c0_seq1_5 [1558 - 152] (REVERSE SENSE) len=1983 path=[1:0-1126 1128:1127-1982]
c0_seq2_4_rc	comp9774_c0_seq2_4 [1954 - 683] (REVERSE SENSE) len=2111 path=[1823:0-437 3957:438-703 2261:704-815 2373:816-888 2446:889-1029 2587:1030-1414 2972:1415-1418 2976:1419-1601 3159:1602-1602 3160:1603-1681 3239:1682-2110]
c0_seq4_4_rc	comp9774_c0_seq4_4 [1688 - 210] (REVERSE SENSE) len=1845 path=[1823:0-437 2261:438-549 2373:550-622 2446:623-763 2587:764-1148 2972:1149-1152 2976:1153-1335 3159:1336-1336 3160:1337-1415 3239:1416-1844]
c0_seq6_4_rc	comp9774_c0_seq6_4 [1129 - 26] (REVERSE SENSE) len=1286 path=[5309:0-63 2446:64-204 2587:205-589 2972:590-593 2976:594-776 3159:777-777 3160:778-856 3239:857-1285]
c0_seq3_4_rc	comp9930_c0_seq3_4 [1966 - 305] (REVERSE SENSE) len=2063 path=[1:0-993 995:994-1032 1034:1033-1149 8078:1150-1159 1151:1160-2013 2005:2014-2062]

select all | unselect

A list of species letter codes included in the protein names can be found here (opens in new tab).

↑ back to top